ESMFold2 Embeddings

[lordim]

I noticed that with the API, you can get sequence and pair embeddings using the include_embeddings flag on the fold() function.

However, this flag doesn't seem to exist when trying to run ESMFold2 locally. Is there a way to retrieve those embeddings when running ESMFold2 locally? Thanks!

[amesmaczi]

@lordim what error do you get when you try and use this flag?

[lordim]

This is what I get:

It doesn't seem like the flag exists for the fold function.

You can also see that this flag doesn't exist in the source code on the repo:

esm/esm/models/esmfold2/processor.py

Line 327 in 82ee355

def fold(