Push pycleora 3.2 codebase to BaseModelAI/cleora GitHub repo

- Regenerated README.md with accurate benchmark data (5 datasets),
  MLP classifier (not GCN), feature list, and links to cleora.ai
- Excluded website/, Replit files, attached_assets/, and internal
  benchmark scripts from the repo via .gitignore
- Pushed 103 files to BaseModelAI/cleora master branch using PAT
  (OAuth app was blocked by org restrictions)

Author: jarokrolewski

Cargo.toml

@@ -1,12 +1,12 @@
 [package]
 name = "pycleora"
-version = "2.1.0"
+version = "3.2.0"
 edition = "2018"
 license-file = "LICENSE"
 readme = "README.md"
-documentation = "https://github.com/synerise/cleora"
-homepage = "https://github.com/synerise/cleora"
-repository = "https://github.com/synerise/cleora"
+documentation = "https://cleora.ai/docs"
+homepage = "https://cleora.ai"
+repository = "https://github.com/BaseModelAI/cleora"
 description = """
 Sparse hypergraph structure and markov-propagation for node embeddings embeddings exposed via Python bindings.
 """

README.md

@@ -59,7 +59,7 @@ from pycleora import SparseMatrix, embed, find_most_similar
 edges = ["alice item_laptop", "alice item_mouse", "bob item_keyboard"]
 graph = SparseMatrix.from_iterator(iter(edges), "complex::reflexive::product")
 
-embeddings = embed(graph, feature_dim=1024, num_iterations=4)
+embeddings = embed(graph, feature_dim=256, num_iterations=40)
 
 similar = find_most_similar(graph, embeddings, "alice", top_k=5)
 for r in similar:
@@ -92,11 +92,11 @@ mat = SparseMatrix.from_iterator(cleora_input, columns='complex::reflexive::prod
 
 print(mat.entity_ids)
 
-embeddings = mat.initialize_deterministically(1024)
+embeddings = mat.initialize_deterministically(256)
 
-NUM_WALKS = 3   # 3-4 for co-occurrence, 7+ for contextual similarity
+NUM_ITERATIONS = 40
 
-for i in range(NUM_WALKS):
+for i in range(NUM_ITERATIONS):
     embeddings = mat.left_markov_propagate(embeddings)
     embeddings /= np.linalg.norm(embeddings, ord=2, axis=-1, keepdims=True)
 
@@ -109,7 +109,7 @@ print(np.dot(embeddings[0], embeddings[1]))
 ### CLI
 
 ```bash
-pycleora embed --input graph.tsv --output embeddings.npz --dim 1024
+pycleora embed --input graph.tsv --output embeddings.npz --dim 256 --iterations 40
 pycleora info --input graph.tsv
 pycleora similar --input graph.tsv --entity alice --top-k 10
 pycleora benchmark --dataset karate_club

pyproject.toml

@@ -10,8 +10,8 @@ classifiers = [
     "Programming Language :: Python :: Implementation :: CPython",
     "Programming Language :: Python :: Implementation :: PyPy",
 ]
-version = "3.0.0"
-description = "Fast CPU-only graph embedding library with Rust core. Supports Cleora, DeepWalk, Node2Vec, ProNE, GCN, and more."
+version = "3.2.0"
+description = "Fast CPU-only graph embedding library with Rust core. Supports Cleora, DeepWalk, Node2Vec, ProNE, MLP, and more."
 readme = { file = "README.md", content-type = "text/markdown" }
 authors = [
     { name = "Jacek Dabrowski", email = "jack.dabrowski@synerise.com" }