annotation-nf/.github/workflows/build_docker.yml at main · AndersenLab/annotation-nf · GitHub

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# Build dockerfile on change
name: Build Docker (env/annotation.Dockerfile)

on:
  push:
    paths:
    - 'env/annotation.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
  pull_request:
    paths:
    - 'env/annotation.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
jobs:
  build:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2

    # Build Tools
    - name: Build and Publish
      uses: elgohr/Publish-Docker-Github-Action@master
      with:
        name: andersenlab/annotation
          tag: "${{ steps.current-time.formattedTime }}"
        username: ${{ secrets.KSE_DOCKER_USER }}
        password: ${{ secrets.KSE_DOCKER_PASS }}
        snapshot: true
        dockerfile: annotation.Dockerfile
        workdir: "env"
        tags: "latest"
        cache: true

name: Build Docker (env/annovar.Dockerfile)

on:
  push:
    paths:
    - 'env/annovar.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
    - 'scripts/*.pl'
  pull_request:
    paths:
    - 'env/annovar.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
jobs:
  build:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2

    # Build Tools
    - name: Build and Publish
      uses: elgohr/Publish-Docker-Github-Action@master
      with:
        name: andersenlab/annovar
        tag: "${{ steps.current-time.formattedTime }}"
        username: ${{ secrets.KSE_DOCKER_USER }}
        password: ${{ secrets.KSE_DOCKER_PASS }}
        snapshot: true
        dockerfile: annovar.Dockerfile
        workdir: "env"
        tags: "latest"
        cache: true

name: Build Docker (env/annovar.Dockerfile)

on:
  push:
    paths:
    - 'env/csq.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
  pull_request:
    paths:
    - 'env/csq.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
jobs:
  build:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2

    # Build Tools
    - name: Build and Publish
      uses: elgohr/Publish-Docker-Github-Action@master
      with:
        name: andersenlab/csq
        tag: "${{ steps.current-time.formattedTime }}"
        username: ${{ secrets.KSE_DOCKER_USER }}
        password: ${{ secrets.KSE_DOCKER_PASS }}
        snapshot: true
        dockerfile: csq.Dockerfile
        workdir: "env"
        tags: "latest"
        cache: true

name: Build Docker (env/snpeff.Dockerfile)

on:
  push:
    paths:
    - 'env/snpeff.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
  pull_request:
    paths:
    - 'env/snpeff.Dockerfile'
    - '.github/workflows/build_docker.yml'
    - 'env/conda.yml'
jobs:
  build:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2

    # Build Tools
    - name: Build and Publish
      uses: elgohr/Publish-Docker-Github-Action@master
      with:
        name: andersenlab/snpeff
        tag: "${{ steps.current-time.formattedTime }}"
        username: ${{ secrets.KSE_DOCKER_USER }}
        password: ${{ secrets.KSE_DOCKER_PASS }}
        snapshot: true
        dockerfile: snpeff.Dockerfile
        workdir: "env"
        tags: "latest"
        cache: true